rs218477703 SNP Detail

Summary

• ID
  rs218477703
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13262583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAAGAGC AGCAAATGCT
  CTTGACCACA GAACTGTGTC TTAAGTACCA TGCCTTTTAA TTCTGGTAAA TCCTCACATT
  CTCCTAGCAA CATAGAAATA TGACCTATAT ACAATAAAAC TCACCCACTT GATGTTTCCA
  GTTTTCAGTG GCTCTGCTGT GTGAGCCTCA GAACAGTGTA TCTTTCAATG CCCAGATGGC
  W
  GCATGACCCT AAACTCTTCC TCGTGGATGG TCGTCACACA GAGGCTTTTC AAGGGCAGAG
  GTGAGCATCA GCGTCCTATC CACCGGGTGC TGCGGGTGCT GTTGTTTCTG CTATCATTGA
  GGCTGTGCTG GGCATTACTG AGGCTGTTGG AGTACCATGG ACATCGGGTC TGCACCTCAG
  CAGGTCCATG TTTGCTTTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505125	CHEV_8_13212583	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218477703					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13262583 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	884 bp upstream
Rr368496	regulatory region 368496	1389 bp upstream
Rr659886	regulatory region 659886	422 bp proximal
Rr659887	regulatory region 659887	859 bp proximal
Rr659888	regulatory region 659888	1450 bp proximal
Rr659889	regulatory region 659889	1500 bp proximal