rs218501850 SNP Detail

Summary

• ID
  rs218501850
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:93438549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATCCAGTG ATTTGCCAGC
  TGATATTGGT TGTCACTTTC ACACCTCAAC ACAATTCAAA CATATCCTTT ACCTTTGATT
  TTTTTCTTTT CTCTTGACAT GTAAAAGCCA CAAATTGGCC TTTTGTTTAA AGAATTTTAT
  ATTTTCAATT GACTTCTTTT TTCCTGCTTA TTGAAAGTAG GCAGAGTAGA ACCAGGGGAC
  R
  TCTGACAACA ATGGCATTCA TAAACCAGCT ACACACCGCA TGATTTCTTC TCTTCTTTCC
  ATATGCCTAT TTAGTTTGTA TAATTGGATA TACCTTTTTT TTTACTTTAT TAAAATACTG
  AATTTATTTC ATATGTATAT TTTTGTCTCC ATGAAATTTC CACATCTGAC CACTACTATA
  ACTATATTCT ATCATAACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324742171	CHEV_14_93600332	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218501850					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:93438549 () rs orientation: forward

Symbol	Name	Function Class
Gm17922	predicted gene, 17922	987 bp downstream
Pcdh9	protocadherin 9	within coordinates
Tssr129946	transcription start site region 129946	993 bp downstream
Tssr129947	transcription start site region 129947	1020 bp downstream
Tssr129948	transcription start site region 129948	1112 bp downstream