rs218521682 SNP Detail

Summary

• ID
  rs218521682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11684963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCCACCTT TCAACACCAG
  GAGAACGGGG CCAATTAGCG CAGCTTACAC AGGACGGTCC CGGTGGAGAG GGGGCCGATA
  GGCATGGCCG CGACCCCGCC GTCGGCCATA GCAGGTGCAG ACTTGACACC CCCGGCTACG
  AGGGCAGCGC CCATCCCTCC GTGCCTTCAG GGGGCCCTGC ACCCGGTTTC CATTAGACAG
  R
  AGCGCGAGGC CCCCAGTTTC CTCCTCGCCA CGATTCCCGA AGCCCGGCGG CCTCCGCGCA
  AACGGCCTCA ACTGCAGTCT GCCCGCCCCG CTCGGAAGAG CCACAAGTGT GCACATGCGC
  CCTGGATCCT TCGGGGGAGC CGGCGAGACG GACCCCATTT CCGCCCCGCC TCCCAACACT
  CCCCGCGCCC CCGGAGGTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492725	CHEV_8_11634963	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218521682					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11684963 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	within coordinates
Cpgi20087	CpG island 20087	within coordinates
Gm64331	predicted gene, 64331	407 bp upstream
Mir7238	microRNA 7238	731 bp downstream
Rr186041	regulatory region 186041	within coordinates
Rr400761	regulatory region 400761	755 bp upstream
Tssr80389	transcription start site region 80389	63 bp downstream
Tssr80390	transcription start site region 80390	89 bp downstream
Tssr80391	transcription start site region 80391	678 bp downstream
Tssr80392	transcription start site region 80392	730 bp downstream
Tssr80393	transcription start site region 80393	766 bp downstream
Tssr80394	transcription start site region 80394	782 bp downstream