rs218654536 SNP Detail

Summary

• ID
  rs218654536
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13335851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAATAACTT TCTTATGAAA
  AATGCCTCAT AAACCAAACA TTTACAGACA AATTAAGAGA GCGTCAAGTC CATCCGTGTG
  TGAAATCCAT GCTAAGGTCT GCTCAGGCAA GTGACTTTCA TTAGAGCTTC CCTTGTCACG
  GAAGCCAAAG CATTGGGGGC ATTTTCTCTT CCATTATTCT AGTGTTTAAA ATGCATAGGA
  Y
  TTTAAAAAAC GTATGTAATT TGTGTGTATG TGTCCCAACG TGTGTGTGTG TGGAGATCAG
  AAAACAACTG TATTGTCGGT CCTCTTTACC CACCATTTGG ATTGTACTTG ACGGTAGCTA
  CCTTTACCTG TAAAGCCATC CCACTGGCCC CAAAATGAAA AAATCCTCAA CTAACACTGG
  ACAGTCCAGT TGACCTCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505812	CHEV_8_13285851	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218654536					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13335851 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	within coordinates
Cpgi20111	CpG island 20111	1227 bp proximal
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Rr659903	regulatory region 659903	1029 bp proximal
Rr659904	regulatory region 659904	1549 bp proximal
Rr659905	regulatory region 659905	1972 bp proximal
Tssr80437	transcription start site region 80437	1963 bp downstream