rs218734953 SNP Detail

Summary

• ID
  rs218734953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108698985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAACATCAA TTCCAGATGG
  TTGAAAGTAA CTGCAAAAAG TCAAAACCGT ATCAAAGGAA CTGTGTGAAT TTATAATCTT
  AGAGTGCAAT TCTGAAGCCA AAAATGGAAA AGCTATGTTT GCATAACCAC CGTGATGGCT
  ATTCCTGGCT GTCAACTTGA CAACATCTGG AATTAGCTAA AACCCAGAAA TGGCTGGGCA
  Y
  ACCTGCAAGG GATTTGTGCT TACTTAAGTC ATTTGAACTG AAAGACCCAC TTCTAAGCTG
  GACCTCTGAG GTCAGAAAAC ACACTTTCAA TCCAGACCAT TTGACCTGGG AAGGCCCACC
  CTTGATCTGG GCCTGACCTT CTGCTGGAGG CCTATATAAA GATCATGGAA GAAGGACACC
  CTTGCTTTTT GCCTGCTTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866895	CHEV_3_108594587	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218734953					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108698985 () rs orientation: forward

Symbol	Name	Function Class
Rr583315	regulatory region 583315	1950 bp distal
Rr583316	regulatory region 583316	within coordinates
Stxbp3	syntaxin binding protein 3	1511 bp downstream