rs218873644 SNP Detail

Summary

• ID
  rs218873644
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138979455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCCAGCGC TGGCATGTGC ACCTCTAGGA CACTCTTGCT
  GCTTTCATTG TTTCAGTTCT TAAAAGCATA ACTTCAGGGC CTTGGGAGAA CAGAAGAATC
  T
  GGTTGTAAGC AGAGCCCCCT GCTGGCCATC GAGGTCTCTG GCACCCAACC CTTTCGTCTG
  GAGTGGGGCA AGCCAGGACG CTCCCCAGCC ACGGGCTCC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321380559	CHEV_4_138808059	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218873644					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138979455 () rs orientation: forward

Symbol	Name	Function Class
Capzb	capping actin protein of muscle Z-line subunit beta	within coordinates
Rr86750	regulatory region 86750	within coordinates
Rr86751	regulatory region 86751	1546 bp proximal
Rr103236	regulatory region 103236	within coordinates