rs218910232 SNP Detail

Summary

• ID
  rs218910232
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137588500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGCGTGC GCCACCACCA
  CTGTCTGGCA GTTTGTTTGT TTGTTTGTTT ACCTACATGT ATGTGTTTGT CTGGGGTGCA
  GTATGTGCAC ATGTGAATGC AGATGTTTGT AGACGCCAGC ATAGGGCATT GGGTCCCTTG
  CAGCTGGAGT TACAGGTAGT TGTGAGCCAA ATGATACCGG TGCTGGGATC CCCCCCCCGA
  Y
  TCCCCCCCCC ATCACACCTG TGCAAAAGCA ATACATGTTC TTAACCATTT GGCCATCTCT
  CCAGCCCCAA GACCTATCTT AAAAAACAAA AAACAAACCA GCCACACATT TACCACACAG
  GACACACTGA CCTCTCTACT CACAAACTGA GCCACCTACA ACGCTGTGGT AAATCTCTGC
  CGTGTGTGTG TGTGTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321368356	CHEV_4_137417104	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218910232					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137588500 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15140	CpG island 15140	665 bp proximal
Ece1	endothelin converting enzyme 1	1048 bp upstream
Rr602748	regulatory region 602748	558 bp proximal
Rr602749	regulatory region 602749	1059 bp proximal
Tssr39783	transcription start site region 39783	1049 bp upstream
Tssr39784	transcription start site region 39784	1063 bp upstream
Tssr39785	transcription start site region 39785	1081 bp upstream
Tssr44151	transcription start site region 44151	900 bp downstream