rs218970952 SNP Detail

Summary

• ID
  rs218970952
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117640786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGTTGGAGG ACTTATCAGA
  AAACAGTTTG GCTGTTTAAT TGGGACAGCT TTTATTCTGT CTGGGTGGTA TTCTGCGAAT
  GCGGCTGGCA TGGTCTTTAC TCATTGGGAA ATGAAAGTCA CACTCAGGTT TTTCTCTTCT
  CTGGTCTTCA GTGTTACCAC GCCCTTATTC TGCCTGGTTT GAAGGGTCGG GGAGAGTGCC
  R
  GGGGTGTCTC TCCAAAGTCT GGAGGCTCCT CTCTGTTCTT AGGAACACTG GTCAGTCTGG
  GCATGGTGAC AGACGCCTTT AATGTCAGCA TTTAAGAGGC AGATCTCTCT GAATTCAAGG
  CCAGCCTGGA CTACATAGCA AGTTCTAGGC CAGCCAGGGT TACAATGAAC CCCGTCTCAA
  ACACACAAAA CAAAACAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499615	CHEV_10_117241937	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218970952					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117640786 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	415 bp proximal
Rr221673	regulatory region 221673	1430 bp proximal
Rr225990	regulatory region 225990	within coordinates
Rr385360	regulatory region 385360	385 bp upstream