rs219017015 SNP Detail

Summary

• ID
  rs219017015
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45625478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCGTGACG AAATCTGATG
  CCTTCTTCTG GAGTGTCTGA AGACAGCTAC AGTGTACTTA TATATAATGA TAAATAAATC
  TTTTTTTAAA AAGTATACAG AGATAACCTA AGTGCTTATT TCCATCTACC CCTCTCTGTT
  GTCGGATTGT AGATGCTATG TAGTCGGTTG CTCCAAGCTC CTTATGCCTT GACTTTTCTG
  W
  CATAATAGAC TGCTGTTTAA ACTGCGAACT AAAATAAACC CTCTCTCCCT TCTGTTGCTT
  TTCCTGGACT ATTTTATCAT GGCAACAAGA AAAGAAACTA AGATAGCTAG TGACCAGCTA
  GCAACAGAGG GCCTTCTCTG CCCTCTGTCC CCTACAGTGC TGGCATTTGA GTTTATGTCC
  TCATGTTGCT CAGCAAATAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320276494	CHEV_2_45590986	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219017015					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45625478 () rs orientation: forward

Symbol	Name	Function Class
Gm13465	predicted gene 13465	within coordinates
Rr556487	regulatory region 556487	899 bp proximal