rs219021182 SNP Detail

Summary

• ID
  rs219021182
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12503478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGGTCC AGAGGTTAAG
  AGCACTTGCT GCTCTAGCTA AGGACCAATT ACCTGCACCT GGATAGCAAC TCACAAACAT
  CTATAACTCC AGTTTCCAGG CATTGGGTGT CCTCTTCTGG ACTCTGGGGG CACTAGGCAT
  GCATGAGGTG TGCCTACACA CATGCAGGGG AAACACTCAT ACACATAAAA TAAAATAAAT
  Y
  TTTTTAAAGA TTGTTATTGG GTCTCCTGGA GATTGTGGAG AATGGATGGA CAGGAAGGGT
  AACTAAGACA GTGCCTCCTA CTCTTGTTGC TATACCGAAC ATTGATTTGT TTGCTTGGCT
  GGTTTGTTTT GAGACAGGGT CTCTCTACGT AGCCCTAGAA GGCCTTGAAC TCACAGACAT
  CTGTTTGCCC TGCCTCCTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322498730	CHEV_8_12453478	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219021182					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12503478 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	453 bp upstream