rs219029595 SNP Detail

Summary

• ID
  rs219029595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:20412606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATAATGT CCATGTGAGG
  TTCAAATGCA AGTAAGGTTT TCAGTCATTT TTTTTTTCTT TCAAACTATT TCTTGAGCTC
  TTAAACTAAT GTGAATTAAA TGTGCTCTTT ATGGGAGGTA CTGTGCCAAA TGAAGAAAAC
  AAGAAAGATT CCTGACTTCA TAAAGGCAAT ACTCTAGTGC TTACCTTAGT TTATACTTCT
  Y
  TGGAATGACT CGTCTCCAGG ACATGTTACA TAATTCCCAA TGAGCCTGAA TCATTTCCTC
  CATGACGTTT AGATATATGA ACCTTTAGCT ATACGTAACA TTTAGACAAG CTACCTTAGC
  ACTGCTTAGA AACAGCATTT ATCCTGGTTC TTAGTAAACC CAAGGCTCTC TTTCTAATTT
  CCACTGGTGA TTTCAAATGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325739962	CHEV_19_20509732	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219029595					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:20412606 () rs orientation: forward

Symbol	Name	Function Class
D19Mit23	DNA segment, Chr 19, Massachusetts Institute of Technology 23	655 bp proximal
Gm32689	predicted gene, 32689	within coordinates
Rr545031	regulatory region 545031	411 bp distal
Rr545032	regulatory region 545032	497 bp distal