rs219051110 SNP Detail

Summary

• ID
  rs219051110
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:122519687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGG GGAGGGGGTG CACTCCACAG
  R
  AGGTGGGCTG TGGGGGTGAG GACAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322844743	CHEV_8_124316848	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219051110					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122519687 () rs orientation: forward

Symbol	Name	Function Class
Jph3	junctophilin 3	Intron
Rr671926	regulatory region 671926	within coordinates
Tssr79823	transcription start site region 79823	609 bp downstream
Tssr79824	transcription start site region 79824	476 bp downstream
Tssr79825	transcription start site region 79825	460 bp downstream
Tssr83237	transcription start site region 83237	759 bp upstream
Tssr83238	transcription start site region 83238	738 bp upstream
Tssr83239	transcription start site region 83239	716 bp upstream
Tssr83240	transcription start site region 83240	675 bp upstream
Tssr83241	transcription start site region 83241	599 bp upstream