rs219083128 SNP Detail

Summary

• ID
  rs219083128
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39371264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTATAGACA GAGAAAGGCA
  GAGAGAGAAC AGGAATAGAG GAGTAGAGGC TGGGCATAAG CATGCAGAGA GAGGGGGAAG
  GGCAATGGGA AAAAGGGGGA AGAGGGCAAA GGTACAAGAG CAAAAGGAGA AGAGAGCGAG
  AGTGAGGATG GGGCAAACAG CCCTTTTTAT AGTGAGTCAG ATAAACCTGG CTATTGCCAG
  K
  TAACTGTGGG GTGGAGCCTA AATGAAATTT CACCATTTTG GTTTAATTAA AAAAGGAAAA
  ATTAGAAAGA GGTGATTGTA AAGCAGAAAT AGGGTTGTGA TCTTTAGCTA CTTCATGCTG
  ACTTTGGGGC CATGTGTCTC TGGGAAATCT AAGAAAATGG GTATGGGGAT GTTTGTCCAG
  AGTTAGGAGA GTTGGCTATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228542	CHEV_2_39336772	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219083128					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39371264 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	334 bp proximal
Rr61451	regulatory region 61451	1938 bp proximal
Rr373076	regulatory region 373076	1266 bp downstream