rs219128719 SNP Detail

Summary

• ID
  rs219128719
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115524500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCAGATCAT GGCTTCTTCC CTACAACTTC
  TCCatatata tatatatata tatatatata tatatatata tatatataca tatatatacg
  tgtatatata tatatatgta tatatccata cacacacaca cacacacaca cacacacaca
  Y
  atatatatat atatGCTTTG AGGTGTCCCC AACCTAAGAT GCACTGTTTG TAGTTACTGC
  CCGTATTCCC AGGTAACCCT GGTGGGTGGA GGGTGGGAGT GTTGGGAAAG CCTTGGTATG
  TATTCCTCCT CTCCGCGGGG ACAAAGAGGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323863473	CHEV_11_115494988	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219128719					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115524500 () rs orientation: forward

Symbol	Name	Function Class
Gm74409	predicted gene, 74409	1698 bp upstream
Rr231925	regulatory region 231925	1700 bp distal
Rr231926	regulatory region 231926	1501 bp proximal
Rr243179	regulatory region 243179	1779 bp proximal
Rr369445	regulatory region 369445	1873 bp downstream
Rr403120	regulatory region 403120	518 bp downstream
Rr403121	regulatory region 403121	699 bp upstream