rs219253782 SNP Detail

Summary

• ID
  rs219253782
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGAGCAGC AGTCAGCACA
  AAGTCCTCTC GAATAAGGAA GCCCCCACAT ATCGCCTCAG GCTGCTGATC CTTGATCGAA
  AGTAAGGCCA TGTAGGGTCG AGAGTGGGGC TTGACTTCAT GTCCCCCGAT GATCTCCCCT
  GAAGGGAAAG CCAATCATTT TGTGGGCACC TGCTAGATCA CCAGATGGGT TTTGTCTGGT
  R
  GCTCCAGACT TGCTAGGCAT TTGGGAGCCA GGGAGTCCTG GAGTTGGAAG GAGGTTGGGA
  GGAGTGCCCT CATTTTCCCC TTCTTTAAAA GGAGAGAAAT ATAGGTCTTG GCTTATCAAT
  CTTCCTTCCA CACAGTTGGA GGCAAACATA ATTCTCTGGA CAAGGAAATC CTAAGGATTC
  AGCTTGTCTG TCTTCTGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645028	CHEV_14_56880134	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219253782					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498754 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	872 bp proximal
Tssr128924	transcription start site region 128924	875 bp downstream
Tssr128925	transcription start site region 128925	920 bp downstream
Tssr128926	transcription start site region 128926	936 bp downstream