rs219265764 SNP Detail

Summary

• ID
  rs219265764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127870211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA AGAAAGAGAA GGAGGAGAAG
  R
  AGGAGGAGGA GGAGAAGGAA GAAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323531423	CHEV_10_127471398	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219265764					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127870211 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2380	CpG island 2380	926 bp proximal
Gm66417	predicted gene, 66417	within coordinates
Gm66418	predicted gene, 66418	302 bp downstream
Naca	nascent polypeptide-associated complex alpha polypeptide	1233 bp upstream
Rr224438	regulatory region 224438	389 bp proximal
Rr385474	regulatory region 385474	471 bp upstream
Tssr96285	transcription start site region 96285	1072 bp downstream
Tssr96286	transcription start site region 96286	990 bp downstream
Tssr96287	transcription start site region 96287	734 bp downstream
Tssr96288	transcription start site region 96288	667 bp downstream
Tssr96289	transcription start site region 96289	648 bp downstream
Tssr96290	transcription start site region 96290	988 bp upstream
Tssr96291	transcription start site region 96291	997 bp upstream
Tssr96292	transcription start site region 96292	1021 bp upstream
Tssr96293	transcription start site region 96293	1138 bp upstream
Tssr96294	transcription start site region 96294	1245 bp upstream
Tssr96295	transcription start site region 96295	1262 bp upstream
Tssr96296	transcription start site region 96296	1283 bp upstream
Tssr96297	transcription start site region 96297	1295 bp upstream
Tssr96298	transcription start site region 96298	1876 bp upstream