rs219270143 SNP Detail

Summary

• ID
  rs219270143
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12503693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGGGTCT CCTGGAGATT
  GTGGAGAATG GATGGACAGG AAGGGTAACT AAGACAGTGC CTCCTACTCT TGTTGCTATA
  CCGAACATTG ATTTGTTTGC TTGGCTGGTT TGTTTTGAGA CAGGGTCTCT CTACGTAGCC
  CTAGAAGGCC TTGAACTCAC AGACATCTGT TTGCCCTGCC TCCTAGGTGA TCTAAGGAAA
  R
  CACCACCACT CCCTGCCTGA ATAGTGACTG TTTGAAGAAA CAATTGATAC AAGCTATGAA
  CCTTTTCACA CTGTATTGGA TCTTGCTAAT GCTTCTTGTA ACAGCCTCTT AACAGATGTC
  TCCAGAGACC AATTACCACC TGCAGTGGTC TTTACCTGTC CACTCTTTGT AAAAAGGTGT
  CATTACAAAA TGTTGCAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322498733	CHEV_8_12453693	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219270143					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12503693 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	238 bp upstream