rs219324670 SNP Detail

Summary

• ID
  rs219324670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60958969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAATTAT GTTCTTAGAA
  GAAACTAGAA CCGAAAAATA TGTACCCTAC ATTCTGAGAC ATCTGTGAAT CTTTATAGTA
  ACGAATACCT AAGGAGTTTC TACCCAAACT ATAAATGAAA GGAAAAGAAA AAAATCCACA
  AAACCATAAA TAGTAAGTTT CCCAAAAGTC CTAAAAGAAT TTCACAGCTA ATAAATCAGG
  R
  TCTATTTCCC ATCTCAATAG ATTTTTAAAA GCCACAACCA AACCAAAAGA AATGCTTCCA
  ACCCACCAGC CATGAATGAG ATTCCAGTCT ACCTTTACAG AAGGGGTAGT ATACTTACTC
  TCTGGCTGGA AGATAAGCTC ATACACCCAG ACTATCAGCA GAGTACACAG GACACTCCAC
  GCAATGAGCT GCCAGGGCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323327699	CHEV_10_60585938	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219324670					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60958969 () rs orientation: forward

Symbol	Name	Function Class
Gm55864	predicted gene, 55864	1947 bp downstream
Rr401931	regulatory region 401931	1055 bp downstream
Sgpl1	sphingosine phosphate lyase 1	within coordinates