rs219395535 SNP Detail

Summary

• ID
  rs219395535
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34310247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAAACAA ATGTTCTTAT
  CATATTTGTG ACAAGATGCC TAGTAGACCC TCCCAGAGTT CACTTGGATG TCTCAGTATA
  GAACTTGGGG AAATTCTGGT CTACTCTTTT GATTGATAAT AGGAACTTGG ATACAAGGTG
  GCTGAAGCCA TATGGTACTA ACCATGGGGC AGTACTTTCT GCGTATAAGA ATCTCTGCAT
  R
  TGGAGGAGCT AGAGAAAGTA TCCAAGGAGC TAAAGAGATC TGCAACCCTG TAGGTGGAAC
  AACATTATGA ACTAACCAGT ACTCCGGAGC TCTTGACTCT AGCTGCATAT GTATCAAAAG
  ATGGCCTAGT CGGCCATCAC TGGAAAGAGA GGCCCATTGG ACACGCAAAC TTTATATGCC
  CCAGTACAGG GGAATGCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701296	CHEV_3_34155020	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219395535					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34310247 () rs orientation: forward

Symbol	Name	Function Class
Gm52623	predicted gene, 52623	within coordinates