rs219426639 SNP Detail

Summary

• ID
  rs219426639
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:190734352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aggaaagac taaggcaagc ccatagcccg
  gaagggaaag cagcaatcct gaagctctgt gttcagcatc tgaggctagt gacagaatca
  tctggcctct aaaggacttg ggaagctctg cctctctctt gagtcaactt gatcctggcc
  K
  acaactttcc ctggcagaaa tcccgtggct ctggcatctg taatatcctg ggctctccac
  tgcaattgag gcttcctttg agtctcattc agtggcctca caggatcttc tcatggcctc
  tgactcggtc acacactgtc ttaggtcagt                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320194539	CHEV_1_192826034	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219426639					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190734352 () rs orientation: forward

Symbol	Name	Function Class
Gm8407	predicted gene 8407	304 bp upstream
Gm37095	predicted gene, 37095	1357 bp upstream
Gm70616	predicted gene, 70616	1899 bp upstream
Rr426021	regulatory region 426021	245 bp proximal