rs219430685 SNP Detail

Summary

• ID
  rs219430685
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:6609456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTTTTTA TGGGTTTTGT
  GTGTATGTGT GTCTTTGTGT CTACATGTGC ATGTGTTTTT CCAGCTTTTC TTTCCTCTCT
  TTTTGTTTCG TTTTGTTGTT GTTGTTGTTC TGTTTGCTAT GTGTGGGTCT TATTTTGTTT
  TGTTTTGGTT TCTATTTTAT GGCCTGTATT ATAGTTAGGG TTACTAATAC TGTGATAAAA
  Y
  ACCATGAACA AATCAACTTG GGGAGGAAAG GGTTTATTAG ACATTCCCTT CCCACTCACT
  GTTCATCACT AAAGGAAGTC AGGAAAGGAA CTGAAACATG ACAAGAACCT GGAAGTGGGA
  GCTGATGTAG TGGCTGTGGC TTGCTCATCA TGGTTTGCAC AGTCTGCTTT TTTATAGAAC
  CCAGGACTGC TAACCCAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321732606	CHEV_6_6559456	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219430685					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6609456 () rs orientation: forward

Symbol	Name	Function Class
Gm66705	predicted gene, 66705	1286 bp upstream