rs219482967 SNP Detail

Summary

• ID
  rs219482967
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39371402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gctattgcc agttaactgt ggggtggagc
  ctaaatgaaa tTTCAccatt ttggtttaat taaaaaagga aaaattagaa agaggtgatt
  gtaaagcaga aatagggttg tgatctttag ctacttcatg ctgactttgg ggccatgtgt
  Y
  tctgggaaat ctaagaaaat gggtatgggg atgtttgtcc agagttagga gagttggcta
  tttccttgct gtccagggtc tgtggaacca tctgtggata gataggaagg aacaggtcta
  gtggaagaag ctccgtgtct gtgagagaag                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228545	CHEV_2_39336910	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219482967					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39371402 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	196 bp proximal
Rr61451	regulatory region 61451	1800 bp proximal
Rr373076	regulatory region 373076	1404 bp downstream