rs219488282 SNP Detail

Summary

• ID
  rs219488282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13258579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGCGGCTC ATGACTAGAT
  CACGTATAGA TCAGGTATAG CTAGTCATGC CTGGACTAGG GATGCTGAGG CAGAAGGATT
  ATGAATTTGA GGCCAGCCTG GGCTATATAG GAGTTCATGG CCAACCTGGG CCACCTAGTG
  AGACTATATC TTGAAGAAGA GGAGGGGCTG GCTCAGTGGT TAAGAGCACC AACTGCTCTT
  Y
  CAGAGGTCCT GAGTTCAATT CCCAGCAACC ACATGGTGGC TCACAACCAT CTATAATGGG
  ATCTGATGCC TTCTTCTGGT TCTGGTGTGT TTGAAAATAG CTACAGTATA CTCATGTACA
  TAAAATAAAT AATTCAGAGA GAGAGAGAGA GAGAGAGAAT TGAAGGAGCA GGGTACAGGC
  TTTGACTGCC ACCTTCTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505102	CHEV_8_13208579	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219488282					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13258579 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	1854 bp downstream
Rr381722	regulatory region 381722	within coordinates
Rr659881	regulatory region 659881	1808 bp distal
Rr659882	regulatory region 659882	within coordinates
Rr659883	regulatory region 659883	63 bp proximal
Rr659884	regulatory region 659884	183 bp proximal
Rr659885	regulatory region 659885	941 bp proximal