rs219513613 SNP Detail

Summary

• ID
  rs219513613
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108284459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTTCCCA TAAGCCACAT
  GAAGGCTCAA AACCATCTGT ACAGCTACAG TGTACTCACA TACATAAAAA TAAAATAAAT
  AAATCTTTAA AAAAAAAAAA GAGTTTGGTG CCCATGACAG CTCCTGAGCA ATCTCTTCCA
  GGTCAGGGAC ATCTGTTGAT GTGGACTAGG GTTCAGGCAC TGTCTTCAAA CCTAGGAAGG
  Y
  GCCCCAGTGC ATGCTAAAGG TACTGAAAGG GGAATCTTCC CACAGCATGG AGGCAGGGAA
  CCTTGCAGAA AGCCACCATC TCCACTCCTG TAGGCCGGGT CCCAGACACT AAGTGCAGAA
  AGGATAATTG GCTTCTACTC TGCTCTGTGC CCCTTCATCT TCCAGCCCAA GATCATCTGG
  CTAAAGAACA AGATGGACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866577	CHEV_3_108180061	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219513613					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108284459 () rs orientation: forward

Symbol	Name	Function Class
Mybphl	myosin binding protein H-like	Intron
Rr583218	regulatory region 583218	314 bp distal