rs219572818 SNP Detail

Summary

• ID
  rs219572818
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137878628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATCTGATG CCCTCTTCTG GCCTCTGTGG GCACTGCACT
  CATGTTCGTG AGTGCGAGTG TGTGTGTGTG TGTGTGTGTG TGTGCTCGCG CGCGCACGCG
  Y
  CAATCAATCC AAAGTCCCCA AATCCACATT CTTTCAAATG AAAGCATGGT TAGGCCTATC
  ACAGTAATAC CCAAGTCCCT GGTACCAACT TCTGTCTTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320978662	CHEV_3_137835831	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219572818					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137878628 () rs orientation: forward

Symbol	Name	Function Class
4930579F01Rik	RIKEN cDNA 4930579F01 gene	Intron
Rr586090	regulatory region 586090	75 bp distal