rs219589644 SNP Detail

Summary

• ID
  rs219589644
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:63416579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTGTGGATT AGACCTCTCC ACTTCATCCC
  TAGGCTGCAT ACAATTGAAG TGGGAAAGAT GACTGGGGAG GGGGGATGGA ATCTAACAGT
  TCTGTTGACA AAGTGATACA TTCTGACAGA TGACATCACA TTGGAGACTG GCAGAAACCC
  W
  TAGGGACATT TTTTCAGAAA ATCAGATTTG TGAGATAAAA TGTAACAGAG TCAAACAGAG
  AAATTACACA TAAGCTTTAG GACCACAGGA AGATCCCTAT GAACTAATAG TAGATCAGAA
  TCTCAGGATA Tgctggagag atgtctcagt                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319743362	CHEV_1_63423994	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219589644					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:63416579 () rs orientation: forward

Symbol	Name	Function Class
Gm71047	predicted gene, 71047	within coordinates