rs219657027 SNP Detail

Summary

• ID
  rs219657027
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128003249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGGGGGG GTAAGAAAAA
  CAAAGTAGCC CCTTTTCTTT TCCTGGAGGA AATGTTTGTT GCTGTGAGGG TTAAGTTTAA
  CAACAGATGC CAGGGAGATG ATGTCAAGGA AGGCGTGGTT AGAAACCTCA CAAATTCGGA
  TTCCTTTATT CCTAGACATT TCCCCTCCTA CTCACCTATC TCATGTCTGT GAGGGGGCAG
  Y
  CCTGCTAAAA TGAAGGCACA GTCTCGAGAC CTACAACGAA CCTTTCTTGC TCTGTTATTT
  ATCTAACTCA AGGCCATTAG CTTTTTTTAA ATGATCACAT TAAAATATCT TGTACAAGCC
  TTTTTGAAAT CCACACCTTT CCATCTTGTA ACTTTCCCCC TCTTGGTATT TTGAGGCCCT
  GGCTGTCCTG GAACTTGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323532024	CHEV_10_127604436	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219657027					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128003249 () rs orientation: forward

Symbol	Name	Function Class
Rbms2	RNA binding motif, single stranded interacting protein 2	within coordinates
Rr213658	regulatory region 213658	249 bp distal
Rr218515	regulatory region 218515	1752 bp proximal
Rr226545	regulatory region 226545	within coordinates