rs219660006 SNP Detail

Summary

• ID
  rs219660006
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97023438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCAGGAC TATGGACTTT
  GATGGATTAA GTCTTTGTTT TAGTTCTAGC CTGTGGTGTT TTCTACATTC CCAGTTTTAT
  GGCCTGAATG GTACTTATTG ATAGATGATT TCTCCTCGGG TGAAATGGGC CAATTCAAGA
  CAGATTAGAT TATATCAAAG GCAGGTTTAT TGGGAATCTG CTCTCAGGTG AGTTCACTGG
  M
  CCCAAGGATT GAGGCCAGGG GAGTTGCCAT GGGGAGAGAA GGGGAGGGAG AGAGGAAAGA
  GAAAGAGAGA AAGGGTGAGA TCTCAGAGAG AGAAGAAAAG GAGGAGGAGA GACCAAAAAA
  CGTCTGGATT ATATAGGGAG GAGCCTCTGG GGGAAGGGCA GCCCAGCCCC TGGGCTGGAG
  AAGTCAAGGT TGGAGACAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116084	CHEV_9_97041804	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219660006					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97023438 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	within coordinates
Tssr86631	transcription start site region 86631	246 bp downstream