rs219764984 SNP Detail

Summary

• ID
  rs219764984
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:104422044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCAA GGTCAAGATG AGAGCTACTA
  K
  CCCCTGGACC AATGTTATGG CCTTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324514933	CHEV_13_105075616	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219764984					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:104422044 () rs orientation: forward

Symbol	Name	Function Class
Gm60746	predicted gene, 60746	978 bp downstream
Gm60750	predicted gene, 60750	1564 bp upstream
Rr369763	regulatory region 369763	1275 bp upstream
Rr403946	regulatory region 403946	482 bp upstream
Tssr120915	transcription start site region 120915	1497 bp upstream
Tssr120916	transcription start site region 120916	1553 bp upstream
Tssr120917	transcription start site region 120917	1582 bp upstream
Tssr120918	transcription start site region 120918	1600 bp upstream
Tssr120919	transcription start site region 120919	1821 bp upstream
Tssr120920	transcription start site region 120920	1916 bp upstream
Tssr120921	transcription start site region 120921	1955 bp upstream
Tssr120922	transcription start site region 120922	1972 bp upstream