rs219865485 SNP Detail

Summary

• ID
  rs219865485
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101276666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGAC AGTCACCGAG AAGCGCCCGG
  M
  GAGCTGCTCC CACTCTGCCC ACGTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321229931	CHEV_4_101092074	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219865485					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101276666 () rs orientation: forward

Symbol	Name	Function Class
Ak4	adenylate kinase 4	within coordinates
Cpgi14500	CpG island 14500	within coordinates
Gm69573	predicted gene, 69573	within coordinates
Rr596145	regulatory region 596145	140 bp distal
Rr596146	regulatory region 596146	132 bp distal
Rr596147	regulatory region 596147	1018 bp proximal
Tssr37989	transcription start site region 37989	137 bp downstream
Tssr37990	transcription start site region 37990	120 bp downstream
Tssr37991	transcription start site region 37991	91 bp downstream
Tssr37992	transcription start site region 37992	227 bp upstream
Tssr37993	transcription start site region 37993	684 bp upstream