rs219893880 SNP Detail

Summary

• ID
  rs219893880
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62225632 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    attcaaaaa aataaaAATG Tatattcaaa
  ctgtatatag gataaaggga taatatcaaa tatataacaa gcactttcag ttcaataaca
  gaaccccaaa gagcccaact aaagcatggg caaaaggcat ttctccaaag gaaaaatcta
  K
  ttgtcagcag atacatgcaa cgtgctcaat actatagatc attaaagaaa cttatactga
  aactatactg agTTCTggtc tggaggctta tggctgtctt agcactttca gggctgagga
  aggaagatag ctacaagttt gaggtcagct                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325648547	CHEV_18_62252215	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219893880					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62225632 () rs orientation: forward

Symbol	Name	Function Class
Gm41750	predicted gene, 41750	646 bp upstream