rs219914721 SNP Detail

Summary

• ID
  rs219914721
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:55419988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctttcttc tattcagaga agggcaggcc
  tcctatgaat agcaaccaaa catggtgtaa gaaagttaca atatgactag acacttcctt
  tcatagtaaa gccggatgag ccaacccagt ttgaggaaaa gggtcacaaa aggcaaaaga
  Y
  aggaaaagag tcaggcagcc cctgctccCC CTGCCCCCTT CCCCCCCTCT CTTCCTTTCT
  TTCTTTTCTT CCACAAAAGC AGTTTTTATT TGAGGCAAGA AGTCTGACTT ATAGGATTAC
  AGTTCTAAGC ACTCAAATTT AAGTGTTAGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319728280	CHEV_1_55437673	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219914721					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:55419988 () rs orientation: forward

Symbol	Name	Function Class
Cpgi265	CpG island 265	944 bp proximal
Gm8531	predicted gene 8531	366 bp downstream