rs219917495 SNP Detail

Summary

• ID
  rs219917495
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121070611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCAGAGTC ATCTGAGAGG
  AGGGAACATC AATTAAGAAA ATGCCTCCAC ACTGTAATTG GTAGGGGTGG CCCTAGCCTA
  CAGTGGGTGA TGCCATCTCT GGACTGGTGG TCATGGGTTC TATAAGAAAA TAGACTGAGC
  AAGACAGACG AGGCAAACCA TGCAGAGCAA ACCAGTAAGC AGCACCCATC CGTGGCCTCT
  R
  CATCAGTTCC TGCCGCCAGG TCCTTCTCCT AAGTCCTGTC CTGATTTTCT ACAGTGATCT
  GGAAGTGTTA AGCTAAATAA GTCCTTCCTT CCCCAGCTTG CTTTTGGTCA TGATATTTCA
  TCACAGCAAT AGAAACCCTA ACTAAAGCAA GTTGGTATCA AGATGGTAGG GTATAGTAGG
  GTAGAGCTAT GACAACCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851457	CHEV_14_121232421	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219917495					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121070611 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1048 bp distal
Rr287003	regulatory region 287003	1211 bp distal
Rr287004	regulatory region 287004	990 bp proximal
Rr390218	regulatory region 390218	812 bp downstream
Rr404289	regulatory region 404289	1099 bp downstream