rs219991564 SNP Detail

Summary

• ID
  rs219991564
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24175115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTCACCAT GAGGTGAACA
  GGTTTCCTCT CCCATATGCT CCTCCCTGTG TTATACAGTG CTCCTTCCCA TTCTGTGCAG
  TGCTCCCCCA TGCTGTGCAG TGCTCCTCCC CATTCTGTGC AGTGCTGTGC TGCTGACGGC
  TCAGAGAAAT AGGGCAGGTG ACAGTGAATG GAAACCTCCC GACTGAGGGT TAAAATACAT
  K
  TCTTGGCACA TGCCAAGACG CTCAGGGGGC AGATATAGGT GGATTTCTGT GAATATGAGG
  TCAGAATACT CTACACAGTT AGCTCTGGGC CAGCCAAGGA TGTATAGTGA GACCATGTCT
  TGAAGCAAAA CAAAATGATA TAAAACCCCC AAACAATCCA ATCAAATAAT CAACCAACAA
  AATAAAAAGC CCTCCAAGCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323597992	CHEV_11_24125115	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219991564					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24175115 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	1158 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	within coordinates