rs219994407 SNP Detail

Summary

• ID
  rs219994407
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:63995095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTATAATA CCCAGAAGCT
  GGAAAGAACT CAGATGTCCT TCAAGAGAGG AATGGATAAA AAAAAAAAGT AGTATATTTA
  CACAATGGAG TACTACTTAT CTATTAAAAA CAATTACTTC ATGAAATTCT TAGGCAAATT
  AGTGGAACTA GAAAATATCA TCCCGAGCGA GGTTACCCAG TCACCAAAGA ACACACATGG
  Y
  GTGCACTCAC TGACAAGCGG TTATTAGCCC AGAAACTCAG AATGCCCAAG CTACAATTCA
  CAGATCACAT GAACCTCAAG AAGAAGGAAG ATCAAAGTGT GGGTGCTTTG GTCCTTCTTA
  AAAAGGGAAA CAAAATACTC ACAGGACCAA ATATGGAGAT AAGGTGTGGA GATAAAGACT
  GAAGTAAAGT CCCTCCAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324068671	CHEV_12_65049308	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219994407					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:63995095 () rs orientation: forward

Symbol	Name	Function Class
Gm59626	predicted gene, 59626	606 bp upstream