rs219995541 SNP Detail

Summary

• ID
  rs219995541
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97446089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATACAAT TATAGACCAC
  TCTGTGTTCA ATTTAAAAAT AATATTTCAG ATTACTGTAT TTAAAAGTAG ATGGTTCTCT
  ATGACCACTG AATGGTTGAG AAAAACTATG GTCAGAGGAA AGATGGATAA ATTGCAGATG
  AGGGGAGCTG AAAATGTCAG ATTTCTTCTT GCTGTAGAAA AGCCAGGCTT CACAGACATG
  Y
  CCACACCATG TCAGGAAGGA GGCACTCCTT GGACTCTCTG TGCTGGAGCA ATATGGTAAG
  AAAGGCTGGG GGCCCATAAA CAACCACCAA ACCCAGGCAG TAGGCAGATG CCAACAAGAG
  CCTGCTGACA GTAGCCTGAT ATAGCTGTCT CCTGGGAGGC TCTGTCAGTG CCTGACAAAT
  ACAGAAGTGG ATGCTCACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324130789	CHEV_12_98718040	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219995541					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97446089 () rs orientation: forward

Symbol	Name	Function Class
Rr387670	regulatory region 387670	within coordinates