rs220002910 SNP Detail

Summary

• ID
  rs220002910
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68506580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTATACC AATCACACAC
  ACACACACAC ACACACACAC ACACACACAC ACACATTTAT ATTAGTATCC ATTATATAAA
  ACCAACATCA TGTGCCCTAG GAAACAAAAT ATGTACAATA TGTAGCACTA CTGAACAACA
  CAAAGAAACA ATGTGTACAG CACATCTATG AATCTCAAAA ATATCATACT GAGATAATGG
  R
  AAAAGATATG TGAATATATT CCAAAGAATT TTGATGGATA AATTCAAAAC TAGAAAGCTG
  AGGCTGAGGA GAAAATGCAG TCGTTAAAGT ACTTGATGTG CAAGCAGTAG AACCTGGCTT
  CAATCACTAC AAGAAACCTT AAAAGCAGCA CTGAAGTCTC ATCTGCATGG CTTACGAGAT
  AAGGTGCGAG CAATGACGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321154723	CHEV_4_68249377	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220002910					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68506580 () rs orientation: forward

Symbol	Name	Function Class
Tssr37618	transcription start site region 37618	431 bp downstream