rs220042314 SNP Detail

Summary

• ID
  rs220042314
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20464211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctgctgtag ttaacctcac tttaacttat
  tcttctactg ctattattat tattttagat gcttgtttat tttctaatga gagagagcaa
  aaaaggatat agatttaggt cattggggag atggcaaggg tctgagaaga gttggggaaa
  R
  agaagccata ataaaaatat attgtatgaa aaacatctat tttcaataag aATTAAAAAT
  AGGAAAATTT AAAAAATATG ATACCACTTG CTTTTAAGAT TTTGTATATG TATATATACA
  TAATATACAT ATtatttatc ttgtttatct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323266998	CHEV_10_20308271	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220042314					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20464211 () rs orientation: forward

Symbol	Name	Function Class
Pde7b	phosphodiesterase 7B	within coordinates
Rr226877	regulatory region 226877	591 bp proximal
Tssr96955	transcription start site region 96955	1053 bp downstream