rs220046807 SNP Detail

Summary

• ID
  rs220046807
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:67879581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCCCTCA GCTGCTCCTC
  TGAGACCTGC ACCGAGGCAG GGGCATGCCA CCATTGCTCT CCTGGCATTG GTTCCTCTTG
  GAGGTACAGC GGTCAGGGAG CTCCCCCTTC TGCTTCTGAC AGAAGGCCAG TATAAAAAAG
  GGGGCAAGAC GAAGCCTGTG CCCCCTGCAG GCTGCTGTCC TTCCCTCTTC TTCCCTCCCT
  T
  CCCCCCCCCC CCCCGCAACC CCCAGGGCTA AACAAGGACT GACCAAATCT TGAGGCTGGA
  AGGCCAGTGG TTGGCGCCTA GCCTTCCCCG TGCTCTGCCT CTGTCCACCC ATCCGTCTGC
  TGCTCACAGG TGGACAGTGC AATCCTCAAC TCCAGCAGCT GCTCTTACAG GCCCTGGGGA
  CTTCAGCTGG GGACCGCGGT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	C58/J	CBA/J	DBA/1J	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J	WSB/EiJ
ss371752666	MGP_WTSI_7_75374719	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	C58/J	CBA/J	DBA/1J	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J	WSB/EiJ
rs220046807					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss371752666	MGP_WTSI_7_75374719	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:67879581 () rs orientation: forward

Symbol	Name	Function Class
Igf1r	insulin-like growth factor I receptor	within coordinates
Rr648449	regulatory region 648449	1050 bp distal
Rr648450	regulatory region 648450	1073 bp proximal
Tssr67120	transcription start site region 67120	1711 bp downstream
Tssr67121	transcription start site region 67121	462 bp upstream