rs220079846 SNP Detail

Summary

• ID
  rs220079846
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:36532205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATAAAAAT GGCTACTGCA TTAGACTTTA
  GTCTGTCTAA GTTTTACACT CTACCTTCCA AGTTCACAGG GTCACTTAGA GTGGTGCCAG
  TCTTGGATAC AAACGCTCTC TCAGTGGGCA CCCTGGCAGG TTCTACCTTC CACCGGTGCA
  R
  CCTTCATTCC TTCCATTCAG TGCTGTGCCT TTAGTTGACC TTGAGAACAA CGGTCTTGCC
  TTCTAGTATT TGTTCTAGAC CTGCTGACAG CATCACACAC ATTCCGGGAA AATGGATGAT
  AACTAACTGG TAAATTTGTA GACATACCCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324008674	CHEV_12_37208793	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220079846					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:36532205 () rs orientation: forward

Symbol	Name	Function Class
Crppa	CDP-L-ribitol pyrophosphorylase A	Intron
Rr387069	regulatory region 387069	within coordinates
Rr465183	regulatory region 465183	1219 bp proximal