rs220095669 SNP Detail

Summary

• ID
  rs220095669
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97116332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTATCTC TCAGTCTCTG
  TAGGCTTCTT TGCCAAGTTG AGGAGCGAGG TCCGACTGTG ACTTCGGCTG ACGGTGGCTG
  GGACAGGAGT GGCTGGGGGG TGTTTTAAAA GCTCTTTATG CCCTTGACTT CACTGTCTGG
  ATCATCTCAG AGTTTCCACC TGTAGAGCGT GTATCCTCTG AGAATTGATC ACACTGTCTT
  S
  ATCCTTTGAA TATCAGGTAC TTTTAAATTG AATTTTAGGC ATTTTGGGCA TCACATTATA
  AGTCTTTTGG TCTTCTTATC TACCATGGGG AATGTTGATT TATATTATTA GCAGGTAATC
  AGCCTCATTA GGTTCAAAGT TTTCCCTTGA CATTTGCAGA TGGTGGTTGC AATGGAAGCC
  TAGCTTCTGA AGCCTTCACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117123	CHEV_9_97134698	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220095669					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97116332 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	179 bp upstream
Rr383804	regulatory region 383804	1337 bp upstream
Tssr2982	transcription start site region 2982	106 bp upstream