CATGGGACAC TCTTCCCACC ATGCCATGCC GTAAGGGCAT ATGGTTGCTA TTGTTAAGTC TTAAGAGTTC AGCCCCTCTG GGACACTGGC CCGTGAGCCA CACGCCCAGC TGGGGCCCCA CCAAGGCGAC TCGCCCTTCA CTTTAGTGAT GGCTCTAGGC AGTCAAGGCT AGCCACCTGG AGCAAGACCA GGGGCCTGGG A GAAGGAGGAG TTTGGCCACA CAGCAGAGGC CCAAGGTTCC ACCACCGCCC AACTTAGAAA CCAGTCCTCT TTAGACAATT CCATCAGCTC AGCCAGTATC CCGGATCCGG GAGACCGAGT CCACGCCGTC CTCAAGGCCC CCCCCCCCCC CGGCACCTCC AGAAACCACC TAGTCCAGGA AGCAGCTTCC GGGCCCAGGA A = A Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss324170079 | CHEV_12_113911585 | CHEVERUD | SCREENING_POP | f | SNP | A | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs220140142 | SNP | A | A |
Location: Chr12:112639808 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Akt1 | thymoma viral proto-oncogene 1 | within coordinates | ||||||
Cpgi5173 | CpG island 5173 | within coordinates | ||||||
Gm30150 | predicted gene, 30150 | 1114 bp upstream | ||||||
Tssr115391 | transcription start site region 115391 | 1038 bp upstream | ||||||
Tssr117875 | transcription start site region 117875 | 1797 bp upstream | ||||||
Tssr117876 | transcription start site region 117876 | 1330 bp upstream | ||||||
Tssr117877 | transcription start site region 117877 | 642 bp downstream | ||||||
Tssr117878 | transcription start site region 117878 | 701 bp downstream | ||||||
Tssr117879 | transcription start site region 117879 | 819 bp downstream | ||||||
Tssr117880 | transcription start site region 117880 | 969 bp downstream | ||||||
Tssr117881 | transcription start site region 117881 | 1000 bp downstream | ||||||
Tssr117882 | transcription start site region 117882 | 1379 bp downstream | ||||||
Tssr117883 | transcription start site region 117883 | 1400 bp downstream | ||||||
Tssr117884 | transcription start site region 117884 | 1452 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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