rs220183164 SNP Detail

Summary

• ID
  rs220183164
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12586093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGGGTTGG GGGAGGGTAT
  AGGGGACTTT CAGGATAGCA TTTGAAATGT AAATGAAGAA AATACCTAAT AAAAACATAT
  AAAAAGTTAA AAAATATTTA AAAAATAAAA TAAAAACAGC AGTAAAAGAG AAAAAGACGC
  AATAAAAGTC TATAGAGACT TAAATCAAGT TTTTAAATGT GTAAAATATA TTTCTGATTT
  Y
  TTAGTATGAC ATTTATATTT CTTTTCTGAG TTGTGAACTT TATTAGTTAC CTTTCTAGTC
  ACTATAATAA AGTACCATGA CCAAGGCAAT TGTTGAAGAA AGAATTTATT TGGGCTTACA
  GTTCCACAGG TCTAGAGTCT GTGACGACGG AACAGAGAGA GGCAGCAGGT GCCAGGTATG
  GCATAACTGG AAAGAAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323899623	CHEV_12_12542898	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220183164					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12586093 () rs orientation: forward

Symbol	Name	Function Class
Rr266589	regulatory region 266589	893 bp distal