rs220184443 SNP Detail

Summary

• ID
  rs220184443
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24174359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAGTTGG AGGGACTGTA
  GGAGAGAATC TGCTCTTGCC AGCTCTGTTT GAAGACACCT TCTGAGCCAG GACACCAGCC
  ATGTAGGTTG TTGCTTTGGA AAAGGTTTCT CACAGTGTCA TGGACAATGT CAGTGTCATC
  ACAGAGATCC CTGCTTTTAG CCTGCTTTCC CTTAGAGTAT CCTCCTGGAC CTAGCTACAG
  R
  GTGGGAGACA GAAACTAACC AGGAGACAAC TGATTGAAGT TCATATGTCC CTGATATTAG
  TTGCAAATCT CCTGGTTGTC AGTGCTAGAA TGGCCCCTGG GACGGGCTTA GGAGGAAAGG
  GGGTTGGGGT GGGGTATTTA CTGGTTCACA CAGTAGTTCT TCCTCAGGGG AAAGGCTCCT
  GGCTTCCCTT CTTAGGGATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323597975	CHEV_11_24124359	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220184443					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24174359 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	1914 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	357 bp upstream