rs220185468 SNP Detail

Summary

• ID
  rs220185468
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79212377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAACGA GCACAGTGCT
  CATCTGTCGG TGACTGTGGG CATGTGGGCA TGTGCAGGTG AAGTCAGAGG ACAAACACGG
  GTGTCACCTG GTGCTGGGGA TGGCTCTCAT GTCCCTGTGC TTGTGCAGTC TGTACTTTGC
  AGACGGGCTG TCTCTCCAGG CCAGAGATTC TGAGATTCTT TCGGGCTTGA TAACTTGATA
  Y
  AGTGTATTAC ATTGTTGTGC TGAGATTCTT TCGGGTTTGA TAATGTGATA CAGTGTAATA
  CATGTTGTGC TTTTACCTCT GACTTAGTTC TCTGTGTGTG CTTGTTTTGA AACAGGATCT
  TATTGTGTAG ACAAGACTGG CCTCCAATTT TCTTTTCTTT CTTTCTTTCT TTCTTTCTTT
  CTTTCTTTCT TTCTTTCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322720227	CHEV_8_81009647	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220185468					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79212377 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	286 bp downstream
Rr186904	regulatory region 186904	224 bp proximal