rs220192272 SNP Detail

Summary

• ID
  rs220192272
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:121395575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACAAAAAT AATGCAACCA
  AATCACAGGG CCCCCAATGG AGGAGCTAGC GAACGTATCC AAGGAGCTAA AGGGATCTGT
  AACCCTATAG GTGGAACAAC ATTATGAACT AACCAGTACC CCGGTGCTCG TGTCTCTAGC
  TGCATATGTA TCAAAAGATG GCCTAGTTGG CCATCAGTGG AAAGAGAGGC CCATTGGACA
  Y
  GCAAACTTTA TATGCCCCAA TACAGGGGAA CGCCAGGGCC ATTAAAAAAA ATAATAATAA
  TGCAACCAAG TCAAGCTGGG ATCTGGCCGC CTGTAGCGGT GGAGGGATGC GGGCCTGGAC
  CCTGGCTTAC TGAGTCAGGG CGAAGGATGC TTTTCAGATT GTGATCTGTT ACTTACACCA
  GCCACCGTAC CCCCTTTCGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323513375	CHEV_10_120996726	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220192272					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:121395575 () rs orientation: forward

Symbol	Name	Function Class
Gm68077	predicted gene, 68077	696 bp upstream
Tbk1	TANK-binding kinase 1	within coordinates