rs220226573 SNP Detail

Summary

• ID
  rs220226573
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34726776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATATGATATG TATATGTGTG TGTGTGTGTG TGTGTGTTTA
  ATACTTTTGT CAGGCAAGTA GAATATTTCT CTTTAGATGC TTTTGATTTC CACCCTGAAC
  T
  GAGTTTTTTG AGCAAATTTT TCCCCTTTCT TAAAAGGCTT AAAAGGATTA TAGATAGGAG
  GAGGAGGAGG GGAGAGGAGG AGAAAAAGAG GAAGACAGG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322576440	CHEV_8_35322676	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220226573					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34726776 () rs orientation: forward

Symbol	Name	Function Class
Gm63978	predicted gene, 63978	within coordinates
Gm63981	predicted gene, 63981	116 bp downstream
Tssr80908	transcription start site region 80908	906 bp downstream