rs220267033 SNP Detail

Summary

• ID
  rs220267033
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52846924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACACCCT TGTAAAGCAG
  CTCCTAGATG AGACTGTGGC AAAGCAGGGG GCAGATCCAC CTTGGGTTCA TGGTCTCAGC
  TTCATATTAC TGCTTCGGTC CATTAGTTGA TTTATTAATT TACAGTGGAA CGTAATCGTC
  AGGACAGGGG TGCCCATGAC CTTGAAGACC ATCTGTGTAC AGAAAAATGC CAGTTTTGTG
  A
  ATCTATTCCA ATGTTTCCCT AATGGTCCAA ACCCAAGTTT CTTACCTGGT TACTCTGCTC
  ATGTCTTAGT AGGAGTCTCA AGCTGGGGAT GTCCGTTCGA TCGCTCTGAG TGCTCCCCTA
  CTTGCTCTGA GTGCTCCCCT ACTTGTCCCA GTTACGGTAG AGGGACCACT CTTTGCCTAG
  GCATACATAC ATCTCTATCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324040945	CHEV_12_53901128	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220267033					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52846924 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	within coordinates
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	within coordinates
Rr466054	regulatory region 466054	133 bp distal