rs220271047 SNP Detail

Summary

• ID
  rs220271047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33875741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTGGGAGC TATTACGACA ACACTATTGT CCTGATCTCT
  GAATTGGGCC TCTCCCCCCG CCAGAAGAAA AGGGGGTCAA AAGCGGGCCA CCTACATACC
  R
  CTCCGAGAAC AACCACAGAT TGTTCCAGCC CTAAGTCAGT GCCAGATGTC CTGACCTCAA
  GATGTACTCT GATACCACCA AGTTCCTGCT TCCCCGTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322148804	CHEV_7_34961335	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220271047					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33875741 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	272 bp downstream
Gm12783	predicted gene 12783	442 bp upstream
Rr380644	regulatory region 380644	within coordinates