rs220271691 SNP Detail

Summary

• ID
  rs220271691
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61903539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTCCCAA ATCAGGGCCA
  ACAATGCGGC TGCATGGGCA GGAGGAGGGG CAGGGAGGCT GTTCAGATGC CCAGAGCCCC
  AGACCTGGGG GCCCAGGATG GAGGGAGGAT GAGAGTTAAG ACCAGGACGT GGCTCAGCCA
  AGAAAGAGCT CAGAAGGGGA TCAGCTGCCC CTGGACCAGT CTGTGGACTG GGGGTTGGAG
  K
  TTGGGGCAAG AATTCAAAGG TGAGGGTACA GGCTGGAGGG TTTCCCAGGT AGAGGGCAGG
  TTCTGTGCCT GGTTTATAGG CAAAGAAGCT AAAGTTCCAG AACTGGCCAG GGCTCCCCTA
  AGGACGAAAA GAGCTGGAAT GGAGAACCCA AAGGTCTCTT TACTTCCTAA GCTTTTCTTT
  GGATGGTACT CATCTGATGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330722	CHEV_10_61530508	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220271691					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61903539 () rs orientation: forward

Symbol	Name	Function Class
D10Mit149	DNA segment, Chr 10, Massachusetts Institute of Technology 149	490 bp distal
Tssr93687	transcription start site region 93687	1121 bp downstream